Koders Code Search: "Mark Brooks"

Results 1-25 of about 87 results found for '"Mark Brooks"' in 0.51 seconds

1 2 3 4

 * Exception.php
 * @package    BioPHP
 * @author         Mark Brooks <markabrooks@users.sourceforge.net>
 * @copyright  2004-2008 Mark Brooks <markabrooks@users.sourceforge.net>
 * @license    GPL

Language: PHP
License: GPL
copyright 2004-2008 Mark Brooks
LOC: 26
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/Bio/Bio/Exception/Exception.php

AppExceptions.php

/**
 * class      AppException
 * vim: set expandtab tabstop=4 shiftwidth=4 foldmethod=marker:
 * @desc      PlasmidbException funcs
 * @author      Mark Brooks <markabrooks@users.sourceforge.net>

Language: PHP
LOC: 3
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/plasmidb/plasmidb/lib/AppExceptions.php

Router.php

/** 
 * @class      Router
 * @author      Mark Brooks <markabrooks@users.sourceforge.net> 
 * @desc      Simple Router
 * @package Phli

Language: PHP
LOC: 13
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/Phli/Base/Utils/Router.php

AlphabetFactory.php

 * Factory Class to produce sequences
 * @package    BioPHP
 * @author         Mark Brooks <markabrooks@users.sourceforge.net>
 * @copyright  2004-2008 Mark Brooks
 * @license    GPL

Language: PHP
License: GPL
copyright 2004-2008 Mark Brooks ...
LOC: 24
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/Bio/Bio/Alphabet/AlphabetFactory.php

index.php

/** 
 * @class      Router
 * @author      Mark Brooks <markabrooks@users.sourceforge.net> 
 * @desc      Simple Router
 * @package Phli

Language: PHP
LOC: 18
Spider_20090227_inc : Plasmidb (project search) : .../009/plasmidb/plasmidb/plasmidb/index.php

IUPAC.php

 * Define the IUPAC Alphabets you know and love
 * @package BioPHP
 * @author      Mark Brooks <markabrooks@users.sourceforge.net>
 * @author      Port from Bio::Python
 * @access      public

Language: PHP
License: GPL
LOC: 71
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/Bio/Bio/Alphabet/IUPAC.php

ProteinTest.php

 * ProteinTest.php
 * @package    BioPHP
 * @author         Mark Brooks <markabrooks@users.sourceforge.net>
 * @copyright  2004-2008 Mark Brooks <markabrooks@users.sourceforge.net>
 * @license    GPL

Language: PHP
License: GPL
copyright 2004-2008 Mark Brooks ...
LOC: 32
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/Bio/Bio/Test/ProteinTest.php

DnaTest.php

/**
 * @package    BioPHP
 * @author         Mark Brooks <markabrooks@users.sourceforge.net>
 * @copyright  2004-2008 Mark Brooks <markabrooks@users.sourceforge.net>
 * @license    GPL

Language: PHP
License: GPL
copyright 2004-2008 Mark Brooks
LOC: 28
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/Bio/Bio/Test/DnaTest.php

FactoryI.php

 * FactoryI.php
 * @uses     Factory Interface
 * @author      Mark Brooks <markabrooks@users.sourceforge.net> 
 * @package BioPHP
 * @version 0.8.2

Language: PHP
License: GPL
LOC: 7
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/Bio/Bio/Factory/FactoryI.php

IO.php

 * Abstract input/output clas     
 * @package BioPHP
 * @author      Mark Brooks <markabrooks@users.sourceforge.net>
 * @version 0.8.2
 */

Language: PHP
License: GPL
LOC: 5
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/Bio/Bio/Root/IO.php

AlignerI.php

 * @uses     Interface for aligning sequences
 * Not currently functional
 * @author      Mark Brooks <markabrooks@users.sourceforge.net> 
 * @package BioPHP
 * @version 0.8.2

Language: PHP
License: GPL
LOC: 7
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/Bio/Bio/Align/AlignerI.php

RnaTest.php

 * Test cases for Rna Seq class.
 * @author     BioPHP
 * @author     Mark Brooks <markabrooks@users.sourceforge.net>
 * @package BioPHP
 * @version 0.8.2

Language: PHP
License: GPL
copyright 2004-2008 Mark Brooks
LOC: 26
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/Bio/Bio/Test/RnaTest.php

Table.php

/** 
 * class      Table 
 * @author      Mark Brooks <markabrooks@users.sourceforge.net> 
 * @desc     `Table` is the Page viewer. 
 * @package Html

Language: PHP
LOC: 17
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/plasmidb/Html/Html/Table.php

ListController.php

/** 
 * @class      ListController
 * @author      Mark Brooks <markabrooks@users.sourceforge.net> 
 * @desc      Controller is a Controller class  
 *                Experimental.  Do not use!

Language: PHP
LOC: 32
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/lib/accessories/attic/ListController.php

SessionMisc.php

/** 
 * Session_Base.php
 * vim: set expandtab tabstop=4 shiftwidth=4 foldmethod=marker:
 * @desc. Baseelleneous funcs.
 * @author Mark Brooks <markabrooks@users.sourceforge.net>

Language: PHP
LOC: 17
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/lib/accessories/attic/SessionMisc.php

AppLinks.php

/**
 * class      AppLinks
 * vim: set expandtab tabstop=4 shiftwidth=4 foldmethod=marker:
 * @desc      AppLinks funcs
 * @author      Mark Brooks <markabrooks@users.sourceforge.net>

Language: PHP
LOC: 12
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/plasmidb/plasmidb/lib/AppLinks.php

Bio.php

 * Bio::PHP base class.
 * @package    BioPHP
 * @author         Mark Brooks <markabrooks@users.sourceforge.net>
 * @copyright  2004-2008 Mark Brooks <markabrooks@users.sourceforge.net>
 * @license    GPL

Language: PHP
License: GPL
copyright 2004-2008 Mark Brooks
LOC: 36
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/Bio/Bio/Root/Bio.php

Base.php

 * Base.php
 * Protein sequence library.
 * @author Mark Brooks <markabrooks@users.sourceforge.net> (!)
 * @package BioPHP
 * @version 0.8.2

Language: PHP
License: GPL
LOC: 2
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/Bio/Bio/Chem/Base.php

Molecule.php

 * Not currently functional!
 * @package    BioPHP
 * @author         Mark Brooks <markabrooks@users.sourceforge.net>
 * @copyright  2004-2008 Mark Brooks <markabrooks@users.sourceforge.net>
 * @license    GPL

Language: PHP
License: GPL
copyright 2004-2008 Mark Brooks
LOC: 42
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/Bio/Bio/Chem/Molecule.php

Alphabet.php

 * similar words.
 * @package BioPHP
 * @author      Mark Brooks <markabrooks@users.sourceforge.net>
 * @author      Bio::Python port
 * @version 0.8.2

Language: PHP
License: GPL
LOC: 174
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/Bio/Bio/Alphabet/Alphabet.php

Factory.php

 * Factory.php
 * @uses     Factory Class to produce items
 * @author      Mark Brooks <markabrooks@users.sourceforge.net> 
 * @package BioPHP
 * @version 0.8.2

Language: PHP
License: GPL
LOC: 33
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/Bio/Bio/Factory/Factory.php

LetterTableData.php

 * LetterConversionData.php 
 * Three letter to one-letter conversion tables
 * @author      Mark Brooks <markabrooks@users.sourceforge.net>
 * @author      Port from Bio::Python
 * @access      public

Language: PHP
License: GPL
LOC: 108
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/Bio/Bio/Data/LetterTableData.php

FormField.php

/**
 * @class      FormField
 * @author      Mark Brooks <markabrooks@users.sourceforge.net> 
 * @desc     `FormField` is a
 *                HTML Form Field for editing information about single entities.

Language: PHP
LOC: 23
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/plasmidb/Html/Html/FormField.php

DataStore.php

 * @class      DataStore.php
 * @desc                
 * @author                Mark Brooks markabrooks@users.sourceforge.net
 * @package           Phli     
 * Coding style:     PascalForClasses{}

Language: PHP
LOC: 33
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/Phli/Base/Utils/DataStore.php

Exceptions.php

/**
 * class      PlasmidbException
 * vim: set expandtab tabstop=4 shiftwidth=4 foldmethod=marker:
 * @desc      PlasmidbException funcs
 * @author      Mark Brooks <markabrooks@users.sourceforge.net>

Language: PHP
LOC: 9
Spider_20090227_inc : Plasmidb (project search) : .../plasmidb/Phli/Base/Utils/Exceptions.php

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